20251125

2025-11-25 00:28:51 +08:00
commit eb3f16c30e
406 changed files with 91653 additions and 0 deletions
@@ -0,0 +1,25 @@
+#!/usr/bin/env perl
+
+use strict;
+use warnings;
+use FindBin;
+
+use lib ("$FindBin::Bin/../../PerlLib");
+use Fasta_reader;
+
+my $usage = "usage: $0 fastaFile\n\n";
+
+my $file = $ARGV[0] or die $usage;
+
+my $fasta_reader = new Fasta_reader($file);
+
+print join("\t", "#fasta_entry", "length") . "\n";
+while (my $seq_obj = $fasta_reader->next()) {
+    my $sequence = $seq_obj->get_sequence();
+    my $accession = $seq_obj->get_accession();
+    
+    print join("\t", $accession, length($sequence)) . "\n";
+}
+
+exit(0);
+