26 lines
509 B
Perl
26 lines
509 B
Perl
#!/usr/bin/env perl
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use strict;
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use warnings;
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use FindBin;
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use lib ("$FindBin::Bin/../../PerlLib");
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use Fasta_reader;
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my $usage = "usage: $0 fastaFile\n\n";
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my $file = $ARGV[0] or die $usage;
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my $fasta_reader = new Fasta_reader($file);
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print join("\t", "#fasta_entry", "length") . "\n";
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while (my $seq_obj = $fasta_reader->next()) {
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my $sequence = $seq_obj->get_sequence();
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my $accession = $seq_obj->get_accession();
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print join("\t", $accession, length($sequence)) . "\n";
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}
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exit(0);
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