biyelunwen/99.scripts/miscs/plastid/consensus_fasta_from_bam.py

#!/usr/bin/env python3
"samtools consensus -r NC_058887.1:11845-11988 --show-del yes -A -H 0.3 -m simple --show-ins yes -f fasta EP.sorted.bam"
	`#!/usr/bin/env python3`
	`"samtools consensus -r NC_058887.1:11845-11988 --show-del yes -A -H 0.3 -m simple --show-ins yes -f fasta EP.sorted.bam"`