IvisTang 7f4e888e6a Add MCMCtree workflow and SNaQ analysis scripts ... - Updated `pixi.toml` to include new R package dependencies for MCMCtree workflow. - Modified markdown file to remove unnecessary simulation data discussion. - Introduced `.lintr` configuration for linting R scripts. - Created `mcmctree.ctl` control file for MCMCtree analysis. - Developed `mcmctree_workflow.r` script to orchestrate MCMCtree analysis with model testing and ESS checks. - Added `06.snaq.jl` script for SNaQ analysis with plotting capabilities. - Implemented `07.mcmctree.sh` bash script to run MCMCtree on multiple alignments in parallel.		2026-01-18 13:26:16 +08:00
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20251213	Add MCMCtree workflow and SNaQ analysis scripts	2026-01-18 13:26:16 +08:00
.gitignore	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
.npmrc	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
netlify.toml	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
package.json	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
pnpm-lock.yaml	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
vercel.json	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00