9 lines
310 B
Bash
9 lines
310 B
Bash
#! /usr/bin/env bash
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mkdir -p hmmsearch
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echo -n > hmmsearch.cmds
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for i in hmms/*.hmm ; do
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j=$(basename "$i")
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echo "hmmsearch --tblout hmmsearch/${j}search.tblout $i ../../01.reference/Zju.pep.fa > hmmsearch/${j}search.rawout" >> hmmsearch.cmds
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done
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xargs -t -P 8 -I cmd -a hmmsearch.cmds bash -c "cmd"
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