biyelunwen

T

agent 7f4e888e6a Add MCMCtree workflow and SNaQ analysis scripts

- Updated `pixi.toml` to include new R package dependencies for MCMCtree workflow.
- Modified markdown file to remove unnecessary simulation data discussion.
- Introduced `.lintr` configuration for linting R scripts.
- Created `mcmctree.ctl` control file for MCMCtree analysis.
- Developed `mcmctree_workflow.r` script to orchestrate MCMCtree analysis with model testing and ESS checks.
- Added `06.snaq.jl` script for SNaQ analysis with plotting capabilities.
- Implemented `07.mcmctree.sh` bash script to run MCMCtree on multiple alignments in parallel.

2026-01-18 13:26:16 +08:00

.vscode

20251125

2025-11-25 00:28:51 +08:00

00.rawdata

20251213

2025-12-13 17:57:57 +08:00

98.results

Add Vercel configuration for rewrites and build settings

2025-12-17 17:47:45 +08:00

99.scripts

Add MCMCtree workflow and SNaQ analysis scripts