IvisTang e467d67723 Add scripts for phylogenetic analysis using MrBayes and RAxML ... - Created `mbblock.txt` for MrBayes configuration. - Implemented `mrbayes.sh` to convert FASTA to Nexus and run MrBayes. - Developed `raxml.sh` to run modeltest-ng and raxml-ng on alignments. - Added `04.filter_ogs.sh` to filter orthologous groups based on taxon count and sequence length. - Implemented `01.run_mrbayes.sh` to execute MrBayes for multiple FASTA files. - Created `02.mbsum.sh` to summarize MrBayes output while skipping high DSF analyses. - Developed `03.run_raxml.sh` to run raxml-ng on filtered alignments.		2025-12-20 23:33:05 +08:00
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01.run_mrbayes.sh	Add scripts for phylogenetic analysis using MrBayes and RAxML	2025-12-20 23:33:05 +08:00
02.mbsum.sh	Add scripts for phylogenetic analysis using MrBayes and RAxML	2025-12-20 23:33:05 +08:00
03.run_raxml.sh	Add scripts for phylogenetic analysis using MrBayes and RAxML	2025-12-20 23:33:05 +08:00
03.snaq.jl	20251213	2025-12-13 17:57:57 +08:00
04.concatenate_ogs.py	Add Vercel configuration for rewrites and build settings	2025-12-17 17:47:45 +08:00
05.densitree.r	20251125	2025-11-25 00:28:51 +08:00
06.alignments_to_nexus.sh	20251125	2025-11-25 00:28:51 +08:00