8 lines
249 B
Bash
8 lines
249 B
Bash
#! /usr/bin/env bash
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mkdir -p hmms
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echo -n > hmmbuild.cmds
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for i in msa/*.fa ; do
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j=$(basename "$i")
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echo "hmmbuild -o hmms/${j}.hmmbuild.out --amino hmms/${j}.hmm $i" >> hmmbuild.cmds
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done
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xargs -t -P 8 -I cmd -a hmmbuild.cmds bash -c "cmd" |