9 lines
273 B
Bash
Executable File
9 lines
273 B
Bash
Executable File
#! /usr/bin/env bash
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mkdir -p cds_aln
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echo -n > pal2nal.cmds
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for i in pep_aln/*.pal; do
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j=$(basename "$i")
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echo "pal2nal.pl $i raw_ogs/cds/${j/.pal/.fa} -output fasta > cds_aln/${j/.pal/.nal}" >> pal2nal.cmds
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done
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xargs -t -P 8 -I cmd -a pal2nal.cmds bash -c "cmd"
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